Question: Recent Problematic Change In The Galaxy Toolshed
gravatar for Florent Angly
6.9 years ago by
Florent Angly370
Florent Angly370 wrote:
Hi, I just tried to upload a new version of the Grinder Galaxy wrapper to the Galaxy ToolShed and am encountering difficulties that I did have in previous versions. When I upload my .tar.gz file, the upload is aborted and I get the error: When I remove my tool_data_table_conf.xml.sample file from the tarball and try re-uploading, I get this warning: These two messages are contradictory. Also, if I am not allowed to define a new datatable with this name, how I am suppose to have a tool use data tables? Thanks, Florent
galaxy • 853 views
ADD COMMENTlink modified 6.9 years ago by Greg Von Kuster810 • written 6.9 years ago by Florent Angly370
gravatar for Greg Von Kuster
6.9 years ago by
Penn State University
Greg Von Kuster810 wrote:
Hello Florent, Sorry you encountered this issue. It results from a recently introduce typo in the tool shed code when uploading into a repo that depends on tool data table entries. I've corrected the problem in the tool shed. I also inspected your repository that contains the grinder tool and noticed that the state of the repository was such that the tool_data_table_conf.xml.sample file was added but not committed, so I committed it for you. I also downloaded and installed this repository into my local instance with no problems, so I believe your grinder repository is now in a good state. Thanks very much for reporting this issue. Greg Von Kuster Greg Von Kuster Galaxy Development Team
ADD COMMENTlink written 6.9 years ago by Greg Von Kuster810
Thank you very much Greg. Florent
ADD REPLYlink written 6.9 years ago by Florent Angly370
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