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Question: Need help with "FASTQ Quality Trimmer" tool
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gravatar for satya.science
4.6 years ago by
satya.science • 0
United States
satya.science • 0 wrote:

I have uploaded my fastQ file but it is not showing in drop down list of fastQ-Quality Trimmer tool. I checked, history is already has been updated. Why it is not showing in dropdown list. 

 

Tool name: FASTQ Quality Trimmer
Tool version: 1.0.0
Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer_by_quality/fastq_quality_trimmer/1.0.0
ToolShed URL: http://toolshed.g2.bx.psu.edu/view/devteam/fastq_trimmer_by_quality

 
fastq-quality-trimmer • 1.5k views
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modified 4.6 years ago by Bjoern Gruening ♦ 5.1k • written 4.6 years ago by satya.science • 0
3
gravatar for Bjoern Gruening
4.6 years ago by
Bjoern Gruening ♦ 5.1k
Germany
Bjoern Gruening ♦ 5.1k wrote:

Hi,

the datatype for your dataset must be set to 'fastqsanger' or converted accordingly with the "FASTQ Groomer". More information about datatypes can be found here: https://wiki.galaxyproject.org/Learn/ManagingDatasets#Format

Cheers,

Bjoern
ADD COMMENT • link written 4.6 years ago by Bjoern Gruening ♦ 5.1k

Thanks, It;s done.

ADD REPLY • link written 4.6 years ago by satya.science • 0
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