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Question: Need help with "FASTQ Quality Trimmer" tool
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gravatar for jcoelhosilveira
4.1 years ago by
jcoelhosilveira • 0
Brazil
jcoelhosilveira • 0 wrote:

I am not able to add my file to this tool.

 

 

Tool name: FASTQ Quality Trimmer
Tool version: 1.0.0
Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/fastq_trimmer_by_quality/fastq_quality_trimmer/1.0.0
ToolShed URL: https://toolshed.g2.bx.psu.edu/view/devteam/fastq_trimmer_by_quality

 
fastq-quality-trimmer • 1.1k views
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modified 4.1 years ago by Jennifer Hillman Jackson ♦ 25k • written 4.1 years ago by jcoelhosilveira • 0
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gravatar for Jennifer Hillman Jackson
4.1 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

Is your dataset assigned to the datatype ".fastqsanger"? If not, double check to see if it is in fact this format, then either re-scale the quality scores or directly assign the type.

This wiki help can explain how to do these steps (includes a video-walk through):
http://wiki.galaxyproject.org/Support#FASTQ_Datatype_QA

General help with tools not recognizing datasets due to "datatype" assignment can be found here:
http://wiki.galaxyproject.org/Support#Tool_doesn.27t_recognize_dataset

Best, Jen, Galaxy team
ADD COMMENT • link written 4.1 years ago by Jennifer Hillman Jackson ♦ 25k
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