I don't know why the mapping procedure doesn't work. My g-DNA sequence is fatsaq format, it can't show in the down list. so I changed the fastaq formate into fastaqillumina, and then i can find it in the ist. when I map these short sequence to the reference genome, the mapping function doesnt work. how to solve this problem?
Thanks a lot.
Tool name: Map with BWA for Illumina
Tool version: 1.2.3
Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3
ToolShed URL: https://toolshed.g2.bx.psu.edu/view/devteam/bwa_wrappers