Question: Need help with "FASTQ to FASTA" tool
0
gravatar for qinyuan564
3.9 years ago by
qinyuan5640
China
qinyuan5640 wrote:

Excuse me,

How can I submit my local FASTQ files to convert with this tool?


 

Tool name: FASTQ to FASTA
Tool version: 1.0.0
Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/fastqtofasta/fastq_to_fasta_python/1.0.0
ToolShed URL: https://toolshed.g2.bx.psu.edu/view/devteam/fastqtofasta

fastq upload format fasta inputs • 1.3k views
ADD COMMENTlink modified 3.9 years ago by Jennifer Hillman Jackson25k • written 3.9 years ago by qinyuan5640

What is your exact problem? Do you get any error? In theory you just pick your file from the select box.

Cheers,

Bjoern

ADD REPLYlink written 3.9 years ago by Bjoern Gruening5.1k
1
gravatar for Martin Čech
3.9 years ago by
Martin Čech ♦♦ 4.7k
United States
Martin Čech ♦♦ 4.7k wrote:

You have to upload the files to the Galaxy first. Click the upload button in to top left corner under the Galaxy logo. 

Then select your files and hit start. After your files are in Galaxy you will be able to select them in the FASTQ to FASTA tool.

ADD COMMENTlink written 3.9 years ago by Martin Čech ♦♦ 4.7k

thank you very much!

At 2014-08-26 10:24:31, "Martin Čech on Galaxy Biostar" <notifications@biostars.org> wrote: Activity on a post you are following on Galaxy Biostar

User Martin Čech wrote Answer: Need help with "FASTQ to FASTA" tool:

You have to upload the files to the Galaxy first. Click the upload button in to top left corner under the Galaxy logo.

Then select your files and hit start. After your files are in Galaxy you will be able to select them in the FASTQ to FASTA tool.

You may reply via email or visit A: Need help with "FASTQ to FASTA" tool

ADD REPLYlink written 3.9 years ago by qinyuan5640
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