Question: long running time on freebayes with a bam file
gravatar for dimitase
3 months ago by
dimitase0 wrote:

Hi, I am using Galaxy freebayes to call variants on a WES bam file. It apparently takes very long to run, and I get error message after 48 hours that I am out of time. I have filtered only 3 chromosomes, making it a much smaller file to analyse, but it also takes very long time...

Does someone know why it takes so long? Can anyone advise how to handle this problem?

Thanks, Dimitar

snp galaxy bam • 129 views
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