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• De Novo Assembly Plant Transcriptome
  Dear Galaxy Expert, I would like to use Galaxy to de-novo assembly single-end read illumina data...
• De novo transcriptome analysis pipeline
  Hello, I am currently running Trinity to do de novo transcriptome assembly of a breeding gland ...
• De Novo Assembly
  Hello, I would like to know if Galaxy can do de novo assembly without a reference genome. Thanks....
• Suggestions For De Novo Assembly Plant Transcriptome Without Reference
  Dear Galaxy Expert, I would like to use Galaxy to de-novo assembly single-end read illumina data...
• DE NOVO TRANSCRIPTOME AND COUNT
  Hi,   I used STAR to assemble contigs for de novo transcriptomics data and used the following p...
• where is the de novo assembler?
  hi, first of all thanks for your hard work! I'm trying to do a de novo assembly of a mouse transc...
• De novo assembly of a genome sequence
  I am new to the Galaxy. Can you do a de novo sequence asembly using the Galaxy? Thanks.
• Velvet in usegalaxy.org
  How can i use velvet assembler in usegalaxy.org for de novo whole genome assembly. ?
• Trinity - De novo transcriptome assembly
  Jobs submitted to Trinity for de novo assembly at Galaxy main hang in "This job is waiting to run...
• de novo assembly
  Hi folks I would like to use de novo assembly and quantification for mink RNA-Seq data. I am won...
• De novo transcriptome assembly and reference guided transcriptome assembly
  Hi, I have four related questions about de novo RNAseq data analysis. I have 4 RNAseq data obtai...
• galaxy tutorial data
  I am unable to find data for doing Microbial de novo Assembly for Illumina Data on galaxy. Can an...
• virome data analysis
  I want to know how to analysis virome data for viral metagenome study from de novo assembled blas...
• de Novo assembly
      Hi, I am new to galaxy and its tool shed. I have been looking for genome assemblers and ca...
• De-novo assembly of a bacterial genome
  I am trying to assemble a bacterial genome of length 8Mb in **orione.crs4.it** . I could successf...
• How to make De novo genome assembly?
  Hi, I have an account "on Main".I can't find Velvet for De  Novo genome assembly. However i have...
• Trinity "Exceeded step memory limit" error?
  Hi, I'm trying to assemble a de novo transcriptome using ~270 million paired end reads in Trinit...
• error running BUSCO in Galaxy
  Dear all, I'm trying to run BUSCO via Galaxy (Melbourne server) to asses my de novo assembled tra...
• Fwd: De Novo Assembly
  Forgive the forwarded email. Not used to working from an iPad.
• Duplicate seq ids in uniref50
  Dear all, I was trying to generate a protein database using the Galaxy tool NCBI BLAST+ makeblast...
• salmon output files in Galaxy
  Hi all, I used Salmon tool in Galaxy to both align to my de novo transcriptome assembly and to qu...