I was trying to repeat one tutorial on RNAseq (RNASeqDGE_ADVNCD_Prep). In the TopHat2 section, I'm trying to align the reads to a built-in genome (saccharomyces cerevisiae sacCer2), but this genome does not appear in the available options. Any idea on what did I make wrong so far?
Thanks in advance!
Tool name: Tophat2
Tool version: 0.6
Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/tophat2/tophat2/0.6
ToolShed URL: https://toolshed.g2.bx.psu.edu/view/devteam/tophat2