Question: Need help with "Map with BWA for Illumina" tool
1
gravatar for christensentrine
4.4 years ago by
christensentrine10 wrote:

Why can't I import my fastq file from my history? I am in the history with all files - gDNA reads are in fastq format. It automatically loads the reference seq. (in fasta format), however I can't load paired-end data? What to do???


 

Tool name: Map with BWA for Illumina
Tool version: 1.2.3
Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3
ToolShed URL: http://toolshed.g2.bx.psu.edu/view/devteam/bwa_wrappers

 

map-with-bwa-for-illumina • 1.1k views
ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by christensentrine10
1
gravatar for Martin Čech
4.4 years ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

There are more fastq quality score formats. Please use the tool FASTQ Groomer to change the format to the one the other tool consumes.

ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by Martin Čech ♦♦ 4.9k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 183 users visited in the last hour