Question: Reference genome of Arctica islandica
gravatar for Aurore.Levivier
4.5 years ago by
Aurore.Levivier10 wrote:


I work on mitochondrial genome of Bivalvia. I would like to align reads generated by NGS platform Illumina. I would like use "Map with Bowtie for Illumina" but no reference genome corresponds to my data. Is it possible to add the mitochondrial genome of Arctica islandica : ; and the mitochondrial genome of Venerupis philippinarum : on Galaxy?

Thank you for your help.

Bests regards


alignment job bowtie • 1.0k views
ADD COMMENTlink modified 4.5 years ago by Jennifer Hillman Jackson25k • written 4.5 years ago by Aurore.Levivier10
gravatar for Jennifer Hillman Jackson
4.5 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hi Aurore,

This is the perfect case to use a Custom Reference Genome. Here are instructions for how to use:

Any questions, let us know.

Best, Jen, Galaxy team

ADD COMMENTlink written 4.5 years ago by Jennifer Hillman Jackson25k
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