Question: reference genome not present in Galaxy
gravatar for margherita.c86
3.8 years ago by
margherita.c860 wrote:

good morning,


i would like to use Bowtie or BWA to map reads from Illumina sequencing to the reference genome : Enterococcus faecium AUS0004 STRAIN but it is not presence as reference genome. what can i do? is it possible to upload it?


thank you


Margherita Cacaci, Roma, Italia 

alignment • 943 views
ADD COMMENTlink modified 3.8 years ago by Bjoern Gruening5.1k • written 3.8 years ago by margherita.c860
gravatar for Bjoern Gruening
3.8 years ago by
Bjoern Gruening5.1k
Bjoern Gruening5.1k wrote:

You can always use a reference genome from your history. Just upload your FASTA file into your history and specify it in BWA or Bowtie.



ADD COMMENTlink written 3.8 years ago by Bjoern Gruening5.1k
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