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• Workflows claim to be successfully invoked after submission but never appear in history
  I'm really trying to report an immediate usability issue but can't find a way to do that. For mu...
• Galaxy workflow help - "This is a new dataset and not all of its data are available yet"
  Hi I would really like to hear your advice here. I am trying to run some RNAseq analysis using a ...
• Middle window empty after trying to start a workflow
  Dear Galaxy Team, Since today I cannot start workflows on usegalaxy.org anymore. I can select a ...
• Workflow with collections
  The task was to download several SRAs from NCBI, align to reference genome, find SNPs. I made man...
• Workflows Not Saving
  Dear list, I have a problem saving workflows, every time I click the save button, the dialog say...
• The uploaded data can not be found but the space was still occupied
  I uploaded my data few days before but restart my computor this morning. When I login to Galaxy, ...
• Workflow variable rename not working
  Hi, I use constantly dataset renaming in my workflows but I have a case where there might be a b...
• Can I analyze my RNA-seq data with TRINITY and/or STAR workflows in Galaxy?
  HI: Can I analyze my RNA-seq data with TRINITY and/or STAR workflows in Galaxy? Where can I find ...
• installed workflow unable to find tools that were installed
  Hi, One of our colleague try to use my tools and workflow that I developed on Galaxy toolshed. S...
• Workflow won't run and can't be viewed
  I am having an issue with two workflows, one that I generated today from a new history and one th...
• Tutorial For Making Workflow
  Hello All, I am new to GALAXY. I tried to make a functional workflow but could not succeed. Can ...
• Problem with using CuffMerge in Galaxy
  Dear all, I want to find differential expressed genes between two RNASeq samples in Galaxy. I w...
• Save/Export Image From Workflow Editor?
  Dear Galaxy Team - [Apologies if this has been answered before on this list before...I couldn't ...
• Failure to download data from EBI-SRA to a local Galaxy instance
  Hi, I find that the galaxy downloading link from EBI-SRA doesn't work on my local galaxy instance...
• Workflows
  Hi Sorry if these questions are obvious but I just don't know how to find the answers. I'm tr...
• Galaxy not running - grey color - waiting process
  Dear Madam/Sir, I am using Galaxy platform for analyzing sequences and so far it was working gre...
• Workflows don't execute after successfully being invoked at https://usegalaxy.org -- RESOLVED
  I've been trying to execute two workflows on several of my datasets, but they won't execute. I ge...
• Galaxy instance not running pbs jobs
  I've attempted to configure a fresh galaxy instance to run jobs with the pbs runner. My job_conf....
• Bacterial RNAseq in Galaxy
  Is there a workflow to follow alignment of bacterial RNAseq. I want to align FAStq file and then ...
• Workflow is not running correctly.
  I am trying to use workflow to perform analysis on multiple data sets. I set up a workflow that I...
• Role of Galaxy in Chemoinformatics
  Hi, I am working in a chemoinformatics research lab in which we mainly working with protein-liga...