Question: Trinity
gravatar for David Joly
7.2 years ago by
David Joly100
David Joly100 wrote:
I want to run Trinity on the "test" instance of Galaxy, but there seems to be a problem. The analysis complete very quickly and I've got no assembled transcripts. In the log file created by Trinity, there is one line: /var/spool/torque/mom_priv/jobs/ 11: not found Any idea? David
galaxy • 1.3k views
ADD COMMENTlink modified 7.2 years ago by Jennifer Hillman Jackson25k • written 7.2 years ago by David Joly100
gravatar for Jennifer Hillman Jackson
7.2 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hi David, Trinity is still under development and really shouldn't be on the Test instance yet (in fact, we are removing it). Very sorry about any confusion. It is a known that assembly tools would be very useful for many of our users (starting from a few sources: SAMTools Pileup, de novo RNA-seq) and are working towards tools/solutions in the near term. To be alerted when new tools are available, you can follow our News RSS feed New tools are always announced in the News Brief, in an email to mailing list subscribers, and sometimes Tweeted. Thanks for using Galaxy! Best, Jen Galaxy team -- Jennifer Jackson
ADD COMMENTlink written 7.2 years ago by Jennifer Hillman Jackson25k
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