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• TRINITY still not working
  Trinity is still not working. Please see picture. ![trinity not working][1] [1]: https://ib...
• Problem with Trinity
  Sorry, but I re run the job again and I still don`t get an answer. The result never change to yel...
• Trinity jobs stalled at http://usegalaxy.org
  Hello, my trinity job is still waiting to run (for two days). Are there still some problems with ...
• Problem with Trinity/Unicycler at https://usegalaxy.org -- Unicycler fixed, Trinity OPEN, follow for updates
  Hi, I've tried to execute my work using Trinity (Beta) via Galaxy. Every time I execute it shows...
• Trinity on queue
  Hello, My jobs for Trinity have been on queue for a week. The jobs are still waiting to be run....
• definition of "KmerAlignCore" in Trinity assembly
  Hi Could you please let me know about definition of "KmerAlignCore" in Trinity assembly?
• Trinity on cloud
  Hi Galaxy Experts, I am doing RNA seq analysis from about large number of datasets. I have creat...
• De novo assembly -Trinity
  Hi All As my project makes a progress I would now like to use Trinity for de novo assembly. I ha...
• Trinity not running- still
  Hi, I've been trying to run Trinity with my data for more than a month now. Currently, it's bee...
• trinity statistical analysis
  Hi I am new trinity user at usegalaxy. I used trinity to assemble my NGS data and received fasta ...
• Trinity still not running
  Hello, Trinity is still not working, job is waiting to run for two days. Magda
• Trinity jobs on hold for four days
  Hi everybody, Is there anything wrong with the Trinity De Novo RNA-Seq assembly? I submitted my j...
• how can i upload my data in GigaGalaxy for assembly
  I need to use the tool "NGS:SOAPdenovo" in GigaGalaxy when I upload my data in GigaGalaxy then it...
• Trinity job not running
  Hi, I've been having a lot of trouble with Trinity. I'm trying to do de novo assembly with paired...
• BAM doens't upload properly
  Hello I am having some problems with uploading my BAMs. After uploading it says that it is still...
• Trinity- error setting metadata
  Hello, I was finally able to get Trinity to run, but I've encountered an error. => "An error ...
• Trinity results mismatch during alignment
  Hello Jen I thank you for your help. I think I have understood why there is a mismatch. I run de...
• Mpileup SNP calling
  Hello I have used SAMtools Version=1.2+htslib-1.2.1 for SNP calling (History option 66 in Trinit...
• Trinity Error, job did not complete
  Hello, I asked a question last week regarding my Trinity assembly. It would not start the run (a...
• de novo assembly in Galaxy using multiple transcriptomes
  I want to do de novo assembly of about 13 fferent transcriptome libraries however in Trinity I fo...
• Operation not permitted for file upload via ftp galaxy.ncgas-trinity.indiana.edu
  Hi, I have registered a Galaxy-trinity account, and was able to login via ftp galaxy.ncgas-tinit...