Question: Problem in genrating Correlation Plot
1
gravatar for pallumeghawat25
14 months ago by
pallumeghawat2510 wrote:

I'm work on differential gene expression. I do have Tophat and cuff link files. I'm not able to generate plot correlation. It needs Heatmap file, how to generate Heatmap file via tophat or cufflinks,

heatmap • 364 views
ADD COMMENTlink modified 14 months ago by subhosaha0010 • written 14 months ago by pallumeghawat2510

When I am directly loading a paired end sequencing sra file in Galaxy with its SRA acession , its not generating two bam files by deafult! Please help.

ADD REPLYlink written 14 months ago by subhosaha0010

Please post your question as brand new question, instead of a reply/comment added to another distinct question. If you ever want to reference another post to add context, the link to it can be included.

Thanks, Jen, Galaxy team

ADD REPLYlink modified 14 months ago • written 14 months ago by Jennifer Hillman Jackson25k

FYI for others: This sub-issue was resolved through email using by explaining the appropriate NCBI SRA retrieval tool (and explaining usage, also available on those tool forms). -Jen

ADD REPLYlink written 14 months ago by Jennifer Hillman Jackson25k
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