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• Galaxy Help!!
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• plotCorrelation and pandas error
  Hey I am using plotCorrelation and I get the following error File "/home/pk3/galaxy/data...
• LefSe problems with data format tool
  Hi. I am trying to use Lefse format data tool and I keep getting an error message, even with data...
• Creating A Galaxy Tool In R - "You Must Not Use 8-Bit Bytestrings"
  Hello, I'm a galaxy newbie and running into several issues trying to adapt an R script to be a g...
• Problem With Cuffcompare
  Hello, I'm using Galaxy tool from about two months. I'm very new to this community. I ran into ...
• Create DBKey and Reference Genome
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• Making PNG figures from plots in R from toolshed (without X11)
  Hi everyone, I'm encountering problems when I want to export a plot from R into a PNG, using sev...
• Manage roles option does not complete
  I'm getting the following error message when trying to load a role from the "Manage roles" option...
• tool.xml : multiple but optional data
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• Jobs suddenly return empty error messages on my local installation
  Hi, I'm working on a local galaxy installation and suddenly every job is ending in an error, even...
• Getting Errors Trying To Enable Samtools_Mpileup
  I am running a local copy of Galaxy, last ran 'hg pull -u' on 2/20/12. I am trying to enable use...
• Server Error Query
  I am using the LEfSe tool on galaxy ( http://huttenhower.sph.harvard.edu/galaxy/root). The upload...
• Error while Using 'run-workflow'
  Hi Everyone , I am having another problem on workflow run using the bioblend library of python fo...
• Pileup error: line length exceeds XXX in sequence YYY
  Hi,    I mapped my reads, filtered unpaired reads, converted to BAM and now I want to generate ...
• Job Error Message When Uploading Data Files
  When uploading data, I keep getting this error message. This happened periodically prior to the c...
• Correctly installing to toolshed
  Hi, I'm new to publishing tools/repository on the toolshed.  I have used planemo and lint and tes...
• No module named Gnuplot
  Hi, I'm trying to generate a chart using "**Bar chart** for multiple columns" but it gives me err...
• Galaxy deleting bcftools_stats pdf output?
  Hi guys - I'm running a local instance of galaxy (17.09) and using bcftools_stats to create som...
• troubleshooting Galaxy with LSF
  Hello, I'm doing my first steps in setting up a Galaxy server with an LSF job scheduler. Recently...
• error downloading databases
  I'm trying to download databases via admin by running data manager tools and I get an error messa...
• error running BUSCO in Galaxy
  Dear all, I'm trying to run BUSCO via Galaxy (Melbourne server) to asses my de novo assembled tra...
• Gnuplot : Recommended Version?
  Hi, I was trying to use the boxplot tool (Graph/Display Data) from within our local Galaxy insta...