Similar posts • Search »

• fastq splitter problem
  fastq splitter is not working on paired end read for some of my file and produce output file with...
• Split barcodes tool output
  Hello,     It seems that the output for the split barcodes tool is text files (txt) rather than ...
• FASTQ file split (forward and reverse not of same length)
  Is there a Galaxy package which will split a previously joined fastq which will have unequal forw...
• Split barcodes tool
  Hello,     I am trying to use the split barcodes tool in Galaxy. For some reason, it does not se...
• Splitting Biased Paired End FASTQ data
  The FASTQ splitter in Galaxy warns that the tool only works if Paired-end data has equal length r...
• splitter not working
  hi everybody. i am very inexperienced in this area, so if you guys can kindly help me to solve my...
• Parallelizing An Ngs Mapping Workflow
  Hello, I'd like to use Galaxy on our local beowulf cluster for NGS workflows. One typical use ca...
• How To Split Paired-End Dataset Of Fastq Format
  I downloaded RNA-seq dataset at FASTQ format from SRA of NCBI. I uploaded the dataset onto Galaxy...
• splitting and rejoining datasets
  I am working with large fastq files which are too big to use on galaxy (about 120 gb, so even aft...
• Need Help To Split Paired-End Dataset
  I am new to the NGS analysis. I need help to solve this problem. As shown in my previous emial...
• How do I down sample a fastq in Galaxy?
  I want to make a small fastq file for testing and demonstration proposes.  On the command line I ...
• problem encoutered in FASTQ splitter !!
  my illumina transcript is not getting splitted by FASTQ splitter?? it has been running for about ...
• (No Subject)
  I am new to the NGS analysis. I need help to solve this problem. As shown in my previous emial...
• Barcode Splitter On Paired End Illumina Reads
  Dear Galaxy team   I am so sorry for repeatedly posting the same question, but I do need some inp...
• TopHat: Error: Couldn't build bowtie index with err = 1
  Hi I'm trying to run TopHat on a Cloudman Galaxy instance and I keep getting the below error. I'...
• Need help with "FASTQ splitter" tool
  I was having difficulty with the FASTQ splitter, it was not finding my fastq file (an SRA-based F...
• splitting paired end fastq reads on galaxy
  Hi, I'm new to galaxy. While working on a paired end data set, I noticed that there is only one f...
• Merging Fastq Files
  Hi I have received Illumina paired-end genome sequence data as a .tar file. When unpacked the dat...