I am very sorry to disturb you with these questions, however I am trying to align 4 bam files (after grooming) usingTopHat since Friday (10/21) and only 2 have be done, 1 is still running and the last one is waiting to run. I am very surprised since usually Galaxy works very well. Is you site overbooked, alternatively could you tell me what I an do to speed up the analysis. Many thanks, sincerely, Robert Dante
Update: The cluster fix has been made and jobs are dispatching normally. Queued jobs will execute - no need to delete/rerun. Tools that require more resources are sent to a busier cluster. That queue is expected to have some continued delays until the backlog of jobs is processed (up to a few days).
Thanks for reporting the problem and for your patience, Jen, Galaxy team