Question: Tophat and Cufflinks are not preocessing
gravatar for obadahbahra
23 months ago by
obadahbahra0 wrote:

Hi, I started a process yesterday (24 hours ago) to map 6 files on Tophat, only two processed and the rest are pended since then. I tried Cufflinks for the two files that worked but they are not processing as well. I also tried to run the Tophat process again, still not processing. Is it a matter of time, or something else I should do? I need to get this done within 5 days. Thank you very much.

tophat cufflinks • 548 views
ADD COMMENTlink modified 23 months ago by Jennifer Hillman Jackson25k • written 23 months ago by obadahbahra0
gravatar for Jennifer Hillman Jackson
23 months ago by
United States
Jennifer Hillman Jackson25k wrote:


Allow queued jobs to stay in the queue until processed completely (grey > yellow > green). Avoid deleting and restarting as this places the new jobs back at the end of the queue again, extending wait time.

If your work is urgent, a local or cloud Galaxy might be the right choice for your project.

Our team will follow up with an update if there is more to share about the cluster status at

Thanks, Jen, Galaxy team

ADD COMMENTlink written 23 months ago by Jennifer Hillman Jackson25k
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