Similar posts • Search »

• FastQ groomer is not recognising my data
  Hey, I'm trying to groom a fastQ file using FastQ groomer. No matter what combination of options ...
• tools for amplicon analysis
  Dear all, I was wondering if somebodys knows if there are specific tools for checking the alignm...
• Min Alignement Count
  Dear Galaxy team, I am performing a differential expression analysis with a cufflinks- cuffmerge...
• Amplicon Analysis With Galaxy
  Hi I'm very new with the Galaxy and its abilities so I need to ask this; is it possible to use G...
• cuffquant job taking way too long
  Hey, so Ive been trying to run a cuffquant job for about 72 hr. Its still in the queue and nothin...
• Amplicon Sequencing Questions
  Hi Everyone, I've got an amplicon that has fixed and variable sequence segments, and Im sequen...
• Cufflinks Analysis Using .Bam Files Generated By Lifescope (Abi 5500 Sequencer)
  Hello, I am new in using Galaxy and I am working on .bam files generated by our sequencing platf...
• meaning of Job status
  Hello, I launched a bowtie2 job on fastq files. The system told me that they were in queue but th...
• Server Error
  I'm getting a server error for every operation that I'm trying. Its telling me to turn on "debug...
• Data Sources Don'T Load In Firefox
  Hi List, I'm trying to go through Galaxy 101, and the first step is halting me (UCSC Main table ...
• Cufflinks not working for a week
  Hi There, I am trying to run cufflinks for about a week by now but job remains on the cue (grey) ...
• Can't do sam to bam conversion
  Hi, cant seem to use samtools to convert from sam to bam format. It gives me the message " This i...
• Changing tools names
  Is there an easy way to change the name of a tool in the tool_conf.xml? without actually renaming...
• Subject: Analyzing Targeted Resequencing Data With> Galaxy
  You can do all the quality filtering with Galaxy, but may involve various manipulations of the da...
• Datasets Permanently Deleted
  Dear all, In the menu "User" -> "Saved Datasets", all datasets are listed even if some of the...
• I can't not convert wig file to bigwig file
  I want to make bigwig file from wig file I did it with wig/bedgraph to biwig tools. But I get ...
• Lastz hangs waiting to run
  Hi all, I have been trying to use Lastz to map an SRA dataset to a small FASTA file containing 1...