Question: Job waiting to run
gravatar for wei-ming_yu
2.5 years ago by
United States
wei-ming_yu0 wrote:



I used Cufflink to run some jobs. It's been quiet some time but all my jobs are still waiting to run.

I wonder if my jobs are already in queue? Should I re-run the jobs?





rna-seq cufflinks galaxy • 678 views
ADD COMMENTlink modified 2.5 years ago by Jennifer Hillman Jackson24k • written 2.5 years ago by wei-ming_yu0
gravatar for Jennifer Hillman Jackson
2.5 years ago by
United States
Jennifer Hillman Jackson24k wrote:


If the jobs are grey, then they are queued. It is almost always best to leave these to execute, otherwise you will lose your place in the queue for no benefit (the job will just queue up again, but at the end). If the jobs are a light blue, then they are paused and this means that an upstream step was problematic. Fix that tool with a re-run and you will be presented with the option to "Resume dependencies" which means to re-queue downstream jobs with the new output as input.

More about dataset states is in the Galaxy Support wiki, Section 2.6

Thanks, Jen, Galaxy team


ADD COMMENTlink written 2.5 years ago by Jennifer Hillman Jackson24k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 110 users visited in the last hour