Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Forum
Planet
All »
Home
Log In
Question: Tophat Jobs Not Starting
0
gravatar for Magdalena Strzelecka
7.0 years ago by
Magdalena Strzelecka • 10
Magdalena Strzelecka • 10 wrote:
Hi, I have submitted some jobs to Tophat, but they have not started since yesterday (Dec 13th); i.e they were in a queue for >12 hrs. I have re- submitted everything again (2 jobs), but the same situation is happening. Is there some issue with Tophat at the moment? Thanks. M. Magdalena Strzelecka, PhD Heald Lab University of California, Berkeley Department of Molecular & Cell Biology 315 Life Sciences Addition # 3200 Berkeley, CA 94720-3200 phone: (510) 643-5002 fax: (510) 643-6791 e-mail: strzelecka@berkeley.edu
rna-seq tophat • 963 views
ADD COMMENT • link •
modified 7.0 years ago by Nate Coraor ♦ 3.2k • written 7.0 years ago by Magdalena Strzelecka • 10
0
gravatar for Nate Coraor
7.0 years ago by
Nate Coraor ♦ 3.2k
United States
Nate Coraor ♦ 3.2k wrote:
Hi Magdalena, This was due to a problem with the cluster Galaxy uses to run certain jobs. This was resolved early last week, although there may have been a few intermittent problems after that time. If tophat still has not run successfully, please let us know. Our sincere apologies for the inconvenience, Best, --nate
ADD COMMENT • link written 7.0 years ago by Nate Coraor ♦ 3.2k
Please log in to add an answer.

Similar posts • Search »

Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 181 users visited in the last hour