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• how solve this error Error executing tool: No dataset upload groups were found.
  hello  I am using new galaxy user and i integrate the  tool inside the galaxy but when i execute...
• Tool Within A Tool
  Hi, I am wondering if it is possible in Galaxy to design a tool whose sole purpose is to run oth...
• Error message in history column for being over disk usage
  I am trying to do a Galaxy tutuorial and I have an error message in the history box stating that...
• Uploading C++ tool to Galaxy toolshed
  I want to add my tool to the Galaxy tool shed so that others can download and play with it. As of...
• How to solve this error: cut: write error: Broken pipe
  I am a new Ubuntu user I installed the Galaxy Project and integrate  tool softsearch  and then ex...
• How to start job on dynamically started openstack hosted pulsar server?
  I'm trying to set up a cloud based tool execution function where a job is started on a local gala...
• Ngs Sam Tools: Filter Pileup Tool Not Working
  Hello, I am currently using galaxy main to run a filter pileup on datasets that used the generate...
• queued for trinity tool
  Hi everybody, I am trying to execute a RNA-Seq analysis using Trinity tool but the job is queued...
• Special Character $ Gets Converted To X In Tool
  Hi, In a test tool that I am working on, I need to enter text preceded by a $ sign to be interpr...
• merge collections into single list of dataset tool
  I am getting the following error Error executing tool: 'HistoryDatasetAssociation' object has n...
• How to integrate and run SoftSearch tool in galaxy.
  Hi, I am Shirish, I installed SoftSearch tool in my system, I run successfully it on command pro...
• Workflow Execution Information Existence in the Back-End
  Greetings: When a Galaxy workflow is executed on the front-end, how can one retrieve a workflow'...
• custom tool and text file
  Hello everyone: I am working on local instance of galaxy . My tool runs the bash script which ne...
• Toolshed tools for Blastn output for galaxy
  I cowrote a wrapper to run blast off the command line and now it can be executed off my galaxy in...
• tophat sra rna seq
  i have sra files from ncbi sra tools i have in my galaxy history. on using tophat i am unable to ...
• Wig to BigWig tool not working
  Hi, I am using several tools while logged into the Galaxy server today. All are executing in a ...
• Cloudman instance: Tophat error
  Hello community, I am encountering the following error when I try to run Tophat Galaxy Version 0...
• Unable To Queue Tophat'S Job For Execution
  Hi, The main Galaxy server is failing to schedule tophat's jobs. Giving error: "Unable to queue ...
• Error when running Galaxy on fasta sequences
  Hi all, I am running Repeat Explorer on a fasta file with about 8.000 sequences I am getting th...
• My queue is frozen
  Hi, can someone from the Galaxy Admin team check my account?  My queue has been frozen for 3 days...
• what is "your galaxy path" ????
  HI guys, I am running my local Galaxy on Ubuntu 16.04. Actually, everything is OK but **such an u...
• Galaxy wrapper for a tool that takes a configfile.txt
  Hi, Maybe I'm asking a beginner question, please bear with me.  I'm currently in charge of the ...
• Trinity run preprocessing
  I am new to Trinity and galaxy instance (https://usegalaxy.org/). I have 17 samples pair ended. I...