Question: Local galaxy of release_18.05 is too slow
0
gravatar for ishenweiyan
12 weeks ago by
China/Guangzhou
ishenweiyan • 0 wrote:

I use Anaconda2-5.2.0-Linux-x86_64.sh and galaxy release_18.05 for my local galaxy, but I found it was too slow to open the web pages. The release_17.09 on the same server is much faster.

I can see some limit when release_18.05 start:

your processes number limit is 4096
your memory page size is 4096 bytes
detected max file descriptor number: 65535
!!! no /etc/mime.types file found !!!
lock engine: pthread robust mutexes

Is this related to my problem? or which options could I set ? Thank you.

galaxy • 168 views
ADD COMMENT • link • written 12 weeks ago by ishenweiyan • 0

Can you please provide some metrics about what pages are slow and by how much?

ADD REPLY • link written 12 weeks ago by Martin Čech ♦♦ 4.9k

This is the screenshot of release_17.09,the main page ( http://myip:8080 ) is fast :

screenshot of 17.09

And here is the screenshot of release_18.05,the main page ( http://myip:8080 ) is slow, it seems static/scripts/bundled is large:

screenshot of 18.05

I don't know why static/scripts/bundled is large in release_18.05, what is more, this files will be much larger when I make Complete Client Build by running make client and yarn run style.

ADD REPLY • link written 12 weeks ago by ishenweiyan • 0

If you are building frontend client yourself you need to run make client-production. Otherwise you will have non-compressed (large and slow) artifacts.

That said there is no reason 1.9MB file should take 23s to load (especially locally). Is there a proxy or something that serves the static content?

ADD REPLY • link written 11 weeks ago by Martin Čech ♦♦ 4.9k
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