Question: MapAlignerPoseClustering on Galaxy
1
gravatar for Karolína Trachtová
10 months ago by
Czech Republic/Brno/Masaryk University
Karolína Trachtová • 10 wrote:

Hello,

I would like to use function MapAlignerPoseClustering from OpenMS in my Galaxy workflow for mass spectrometry data. However, this is one of a few functions of OpenMS package that are not yet in the Galaxy. On the page https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms, I found the statement about MapAlignerPoseClustering saying "These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in by the automatic conversion step". Is there really no way of getting this function into Galaxy? I was able to write wrappers for some of my tools, but I have no luck with MapAlignerPoseClustering as it should take a dynamic number of inputs and give the same number of output files.

Thanks, Karolina

ADD COMMENT • link • modified 10 months ago by Bjoern Gruening ♦ 5.1k • written 10 months ago by Karolína Trachtová • 10
1
gravatar for Bjoern Gruening
10 months ago by
Bjoern Gruening ♦ 5.1k
Germany
Bjoern Gruening ♦ 5.1k wrote:

Hi Karolina,

I added this tool to the OpenMS suite.

Happy research! Bjoern

ADD COMMENT • link written 10 months ago by Bjoern Gruening ♦ 5.1k
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