Similar posts • Search »

• How to add my reference genome to use RNA STAR in usegalaxy.org
  "If your genome of interest is not listed, contact the Galaxy team (--genomeDir)" It is my first ...
• How to add reference annotation in cufflinks
  how to add reference annotation in cufflink ? I am trying to put my Hisat2 output file in cufflin...
• Adding the reference genome of Aedes albopictus in Galaxy server?
  Hello i am doing miRNA analysis of Aedes albopictus sequence by Galaxy server. I am not able t...
• Adding a new index-reference genome
  I am trying to use Galaxy Bowtie2, but an index needs to be added. I need to add Salmo salar geno...
• tophat reference genome
  Kindly add the genome of Pinus taeda and Picea glauca to the tophat reference genome as I am unab...
• How do I add my own reference genome for mapping RNA-seq data
  How Do I Add my own reference genome for mapping RNAseq data? Below is the link for the referenc...
• How to add and use a custom reference genome
  How to import my genome (maize B73v3) into galaxy? I have B73v3 in custom-run UCSC genome browse...
• How To Add A Built-In Index For Tophat2?
  TopHat2 needs built-in index/ reference genome in order for it to run. I need to add hg 16 index ...
• Adding reference genome to Galaxy
  Hi, I want to add reference genome(hg19) from UCSC main table to my Galaxy account,how can I do t...
• Add Other Genomes To Galaxy
  Hi, Is there any chance to add a new genome reference to the Galaxy browser? I am working on the...
• How to upload a reference genome
  Hi!, I am a new user in the Galaxy project and I want to map my reads with a genome that is not i...
• Adding Reference genome to STAR local galaxy
  I am attempting to determine the best way to add a reference genome to STAR. Since there is no da...
• How To Add To Add Hg16 Index Into The Build-In Index / Reference Gnome List?
  How do I add hg16 into the build-in index?
• How to add a bacterial genome to Galaxy database?
  I have my ChIP-Seq data on Galaxy but can't map it because the bacterial genome that I am working...
• How to add and use a custom reference genome
  Dear Sir or Madam, May I know how to add some other genome information for custemerized analysis...
• How to add a genome reference to Bowtie to galaxy project
  I want to map an ostrich RNA-seq data with Bowtie. I want to know where can I find a genome refer...
• why do Galaxy have a reference genome of sheep?
  Hi: I am analyzing RNA-seq data of sheep using Galaxy. But I can not find a reference genome abou...
• Cucumber Genome
  Hi, In the NGS mapping option with "lastz" I cannot find the Cucumber genome.* *Could you please...
• Can't choose custom genome for bed files used in Stitch Gene Blocks
  I'm trying to extract and stitch maf blocks from the UCSC Drosophila alignment that uses the most...
• Reference genome: no options available - use Custom reference genome
  Hi, I am using galaxy and in particular a modified version of a workflow that I found on usegala...
• Reference genome for RNA STAR
  Hi, I am trying to use STAR for aligning RNASeq data but it doesn't have any reference genome. I...
• how to upload a reference genome (NCTC8325)
  I am struggling to upload the reference genome of NCTC8325 to the system from https://support.ill...
• Cucumber Genome
  Hi, In the NGS mapping option with "lastz" I cannot find the Cucumber genome.* *Could you please...
• Data manager for Bowtie for illumina (bowtie1)?
  Is there a bowtie1 index builder? I cant find it in data managers? If not how I can add indexes f...