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• Papillon: a python alternative to plot/heatmap Galaxy RNA-seq data
  Hello, I learned how to do a RNA-seq using Galaxy, without use the terminal. But then, we you wa...
• working with xls file format
  Hi I would like to use xls file format for analysis of RNA-seq datasets. First I would like to ...
• Error when trying to create heatmap
  Hello. I am new to galaxy and trying to learn. I am trying to recreate the heatmap here: http:...
• Error - Heatmap generation / visualization from RNA-seq data using DESeq2 workflow
  Hi I wanted to try generating heatmaps of gene expression using normalized counts file obtained ...
• Differentiate data between two heatmap data sets
  Hello, I had Bowtie mapping alignment file for each of my two ChIP-seq samples. Then, I did heatm...
• Denovo with tophat
  Hello everyone. I am new to RNA Seq and need help. I just want to ask if it is right to do de no...
• using space bug
  hello admin， I have create a RNA-SEQ workflow and run it, but the results cannot show to me,and i...
• small RNA seq using Illumina iSeq100
  Hi there, I just made small RNA seq libraries using the Illumina TruSeq Samll RNA LIbrary kit fro...
• Heatmap using cummeRbund
  Hello, I want to do a heatmap using cummeRbund. Is it possible to select a set of genes (for e...
• multiBamSummary in DeepTools_sample order did not match to the entry
  Hi Everyone, I tried to plot the correlation plots using the DeepTools on the web base Galaxy. ...
• Query Regarding Rna-Seq Data Analysis
  Hi, I am having a fastq file for my RNA data analysis in my computer. How to make it available f...
• I want to know how data is normalized between control group and test group in differential rna seq analysis. Can somebody please explain or suggest some references
  I am a beginer in rnaseq data analysis. I want to know how data is normalized between control gro...
• Profiling a Small Number of Single Cells
  Hi, Hopefully I have posted this in the correct place. I have recently started in a lab and hav...
• RNA-seq data normalisation with housekeeping genes
  Hi there, I just generated a couple of RNA-seq dataset hoping to identify the differentially exp...
• RNA-seq raw data of zebrafish
  Hello! I need RNA-seq raw data of tumors in zebrafish for a PhD job, does anyone knows an useful...
• deepTools computeMatrix sorted values WITH gene identifiers
  I've performed a computeMatrix analysis on a ChIP-seq sample referenced to gene TSSs. This genera...