Question: (Closed) Galaxy interfaces with torque by pbs_python
gravatar for charliedhw
2.1 years ago by
charliedhw0 wrote:

We read "Running Galaxy Tools on a Cluster" page to find how could galaxy interfaces with torque. However we couldn't get how to compile the necessary automation to via Galaxy's egg scrambler as described below.

"galaxy_user@galaxy_server% cd /clusterfs/galaxy/galaxy-app galaxy_user@galaxy_server% LIBTORQUE_DIR=/path/to/libtorque python scripts/ -e pbs_python"

We download galaxy by "git clone -b release_16.07"

"./scripts/" "scripts/" and "eggs.ini" are not in galaxy directory.

How could we download eggs from the Galaxy Eggs distribution sit?

ADD COMMENTlink written 2.1 years ago by charliedhw0

Hello charliedhw!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

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ADD REPLYlink written 2.0 years ago by Jennifer Hillman Jackson25k
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