We read "Running Galaxy Tools on a Cluster" page to find how could galaxy interfaces with torque. However we couldn't get how to compile the necessary automation to via Galaxy's egg scrambler as described below.
"galaxy_user@galaxy_server% cd /clusterfs/galaxy/galaxy-app galaxy_user@galaxy_server% LIBTORQUE_DIR=/path/to/libtorque python scripts/scramble.py -e pbs_python"
We download galaxy by "git clone -b release_16.07 https://github.com/galaxyproject/galaxy.git"
"./scripts/make_egg_packager.py" "scripts/scramble.py" and "eggs.ini" are not in galaxy directory.
How could we download eggs from the Galaxy Eggs distribution sit?