Question: Galaxy interfaces with torque by pbs_python
gravatar for charliedhw
2.1 years ago by
charliedhw0 wrote:

We read "Running Galaxy Tools on a Cluster" page to find how could galaxy interfaces with torque. However we couldn't get how to compile the necessary automation to via Galaxy's egg scrambler as described below.

"galaxy_user@galaxy_server% cd /clusterfs/galaxy/galaxy-app galaxy_user@galaxy_server% LIBTORQUE_DIR=/path/to/libtorque python scripts/ -e pbs_python"

We download galaxy by "git clone -b release_16.07"

"./scripts/" "scripts/" and "eggs.ini" are not in galaxy directory.

How could we download eggs from the Galaxy Eggs distribution sit?

ADD COMMENTlink written 2.1 years ago by charliedhw0
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