Question: (Closed) Merge RNA-Seq files in CLC Genomics Workbench ?
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gravatar for zhang_hbnu
2.1 years ago by
zhang_hbnu0
zhang_hbnu0 wrote:

Hi I now analyzing my RNA-Seq data (illumina, 50bp paired end) using CLC Genomics Workbench to verify the results of Galaxy. But now I encounter a problem: should I merge all these files into one before I can carry out downstream analysis or I don't need to do this and the CLC Genomics Workbench can do this? I have RNA-Seq data (paired end) from 4 groups, each group has 6-7 samples (biological replicates). Each sample was sequenced in several lanes and in each lane produced several RNA-Seq files for each sample. The sequencing technician provided many RNA-Seq files for each sample. I know I can merge several data files into one in Galaxy, But can anyone can tell me what should I do in CLC Genomics Workbench for further analysis. Any help would be appreciated.

Dr. Zhang

rna-seq • 907 views
ADD COMMENTlink written 2.1 years ago by zhang_hbnu0
1

You're already paying CLC for support, call them.

ADD REPLYlink written 2.1 years ago by Devon Ryan1.9k

Hello zhang_hbnu!

We believe that this post does not fit the main topic of this site.

Question is not about Galaxy

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 2.1 years ago by Jennifer Hillman Jackson25k
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