Question: Merge BAM files
gravatar for b.conway-campbell
3.5 years ago by
United Kingdom
b.conway-campbell20 wrote:

The Merge BAM files option is no longer available on NGS:Sam Tools. Where has it gone? How can I merge BAM files (repeat lanes data of RNA-SEQ) now? Any ideas? 

ADD COMMENTlink modified 3.5 years ago by Martin Čech ♦♦ 4.9k • written 3.5 years ago by b.conway-campbell20
gravatar for Martin Čech
3.5 years ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

You should be able to use the following tool to merge BAM files:

ADD COMMENTlink written 3.5 years ago by Martin Čech ♦♦ 4.9k

When I try to merge BAM files I receive the following error

Fatal error: Exit code 127 ()
/galaxy-repl/main/jobdir/011/348/11348779/ line 42: bamtools: command not found
ADD REPLYlink written 2.9 years ago by skasowitz70
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