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• 23andme raw data: list of all (around 640K) SNPs tested?
  Hi, I'm studying 23andme raw date (I thank Martin Cech for the help) . I know that the number o...
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  I followed the directions from the FastQ tutorial for my 32 files. The run produced an output of ...
• How to get rid of the linker of the miRNA raw data?
  How to get rid of the linker of the miRNA raw data? I want to use the raw data, but I don’t  know...
• How to get raw reads from bam file
  Hi, I can't figure out how to get raw reads counts from a bam file. I have 3 different experimen...
• Can limma's voom take normalized counts as input?
  Hi,      I am currently analyzing some RNASeq data from TCGA - which is data that has been proce...
• How to save sequence data and analysis results outside of Galaxy
  I have some important data and an entire analysis of the data saved on Galaxy since 2013. I don'...
• How do I reorder files in history?
  Dear all, I have uploaded many raw data files for 10 samples (8 files per sample). However, uplo...
• RNA-seq raw data of zebrafish
  Hello! I need RNA-seq raw data of tumors in zebrafish for a PhD job, does anyone knows an useful...
• Raw Count Of Genes
  Dear all, I am a Phd student working on chicken genomics, with limited experience in the bio-inf...
• cDNA sequencing data analysis
  I am new to galaxy and sequencing data analysis. I have RAW files from cDNA sequencing and I am l...
• Interpreting Stats output of SAM tools
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• Large datasets and memory usage
  Hi, My data set (multiple, 17 pair ended) has total size of 87 GB. I want to run trinity denovo a...
• Extracting Raw Count Data From Mapping
  Hi, I would like to extract raw counts from tophat output. Does anyone know a way to do this in...
• Internal Fail error 500 or file failed
  What am I doing wrong? My files have an extension of .fastq. I am told that these files contain r...
• Analysis Of 454 Data
  Dear All, I'm very very much new to this ngs platform... and I'm currently getting started to w...
• TopHat: Raw junction and juncs files
  Hi I'm having a hard time finding information on what exactly the advantage of using the Raw Jun...
• Bowtie Raw Input
  Hi There Im trying to map RNA-seq data to a reference genome in Galaxy (Main instance) using bot...
• What is the difference between a label and name?
  I am very new to Galaxy and am learning about workflows with the final aim of making a workflow f...
• fastq convert problem
  Hi. I have a problem using my data on galaxy for proces radtags. First I had to trim my raw data ...
• Fw: [Galaxy-Bugs] Galaxy Tool Error Report From Bsib@Leeds.Ac.Uk
  Hi Jen, thanks. I am a bit confused: on Galaxy the only human genome listed is hg_g1k_v37. So w...