Similar posts • Search »

• FIle transfer from GEO to usegalaxy.org
  I'm trying to import some public GEO data into usegalaxy.org - specifically, the mouse RNA-seq da...
• "Get Data" from Metazome.net into Galaxy?
  Hi, I am working on the hemichordate Saccolgossus kowalevskii and I am in the process of conduct...
• Error when importing data from Shared Data
  I'm following along with the Coursera course on Galaxy, and in the Sequence Data Quality Control ...
• Realigner Target Creator will not run?
  I have been running the pipeline below to try and call SNPs from RNA-Seq data but have encountere...
• "History could not be imported. Please contact a Galaxy administrator" error
  I am having my students use the RNAseq tutorial data from jeremy's post here: https://usegalaxy....
• upload data to galaxy from the CGhub
  When I paste the url of the data from the CHhub,but I failed to import the data to the galaxy, co...
• Importing Reference Genome Into Galaxy For Tophat2
  Hi, I am new to the field of RNA-Seq analysis. I'd be very greatful if somene could help me with ...
• Import data via http link that requires a username and password?
  I saw the information [here][1] on how to import files via FTP. Our users have access to their fi...
• How to upload Mouse reference genome mm10, in Fasta format to My Galaxy History
  I tried to use an imported "tuxedo protocol" RNA-seq pipeline from public workflows. I found mous...
• Import Files From Filesystem Path : No Redundance?
  Hi all, I have used the option "Import files from filesystem path" to import a complete arboresce...
• Downloading GFF files from NCBI
  Hi: Can someone help me figure out how to import a genome from the NCBI website into Galaxy in a...
• EBI SRA Data Import
  Hi guys i have just imported these datasets into Galaxy in fastq format http://www.ncbi.nlm.nih...
• HT-seq count does not recognize "gff" annotation dataset == assign GTF and consider an alternate annotation source
  Hi all I have been using galaxy tutorial for RNA-Seq of Drosophila malanogaster. I have done bw...
• Is it important to perform Adapter sequence removal step?
  Hello, Can I ask is it important to perform the adapter removal step, when I ran the RNA-seq fas...
• Importing Histories From Main
  Hi - There are features in the public test Galaxy that I would like to test using data from a sav...
• RNA-seq data extract
  Galaxy upload RNA-seq data（.gz） need to extract it？ How to extract RNA-seq data（.gz）？ Thanks!
• Counts Of Mapped Reads For Each Gene?
  Hi Jen and other galaxy-users, I am analyzing our RNA-seq data. First, I mapped the RNA-seq da...
• RNA-seq data analysis workflow!
  Hello, I am a newcomer to galaxy based data analysis.I am looking for a workflow to analyse RNA-...
• Load data files in Galaxy (local) from same machine
  Hi, I have a local Galaxy, is it possible to load data from account/path of another user on the ...