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• is mothur tool working ?
  I tried to use mothur (fastq.info) and I got an library access error: Fatal error: Exit code 127...
• Cluster sequences into OTUs Mothur Fungal ITS2 sequences
  Can someone help me and explain to me how to clustering sequences into OTUs with Mothur ? I hav...
• problems installing mothur
  Hi, I am trying to set up Mothur toolsuite from jjohnson on my local instance and having some tr...
• mothur make.contigs error
  Hi all, I tried to run the mothur's make.contigs command from the public galaxy server's tools m...
• krona from mothur results
  Hi I'm trying to produce a krona graph from a taxonomy file from mothur, but galaxy platorm does ...
• mothur silva.nr_v132.align datasets etc
  Good morning, I am trying to run the mothur command align.seqs using the NGS: Mothur tool. I kee...
• Mothur make-contigs missing dependencies
  So, this is my first time using Mothur on Galaxy. I am following the protocol https://galaxypro...
• Help with LEfSe
  I'm using the LEfSe algorithm, however I have some difficulties. How come I succeeded line C (pl...
• Galaxy Help!!
  I am trying to use LEfSe but keep getting the same error. My data loads fine, but then I cannot g...
• add test-data folder in repository of tool shed
  I tried to add test-data folder to my repository in toolshed, but there aren't any option to add ...
• get krona graph from mothur output
  The excel template you get from Krona tools is about categories of granola. The instructions the...
• LefSe problems with data format tool
  Hi. I am trying to use Lefse format data tool and I keep getting an error message, even with data...
• Problems with LEfSe tool
  Hello, I have problems with LEfSe tool since a long time. First of all, the server takes a lot ...
• Chimera.uchime issue in mothur pipeline
  Is there a way that I can see the logfile in real time? I want to check if the uchime step is run...
• Align.seq Mothur error message
  Hi I got an error message (TERM environment variable not set) with the command align.seq in Mothu...
• Mothur OTU cluster problem in Usegalaxy ; I don't have training data set
  when i am trying to work on meta genomics using Galaxy server, i am unable to perform Classify.se...
• Mothur not working
  Dear All In Mothur when doing make.contigs I am getting the below error: 'Fatal error: Exit cod...
• How To Add Alignment To The Maf
  Hi galaxy, I'm trying to know the coding potential of my RNA-seq transcripts by phylogeny analys...
• An Error In Reporting A Tool Error...
  Hello all I am working with the LefSe module. Over the last two days, I am gettimg a recurring er...