Question: Add constaxonomy file from Mothur to Lefse
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gravatar for tone.tannas
8 months ago by
tone.tannas0 wrote:

I try to use my Mothur data in Galaxy to run Lefse. I manage to add my shared.file and design file, but not constaxonomy file. What can I have done wrong?

galaxy • 229 views
ADD COMMENTlink modified 8 months ago by Jennifer Hillman Jackson25k • written 8 months ago by tone.tannas0
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gravatar for Jennifer Hillman Jackson
8 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

These tools work together best when all the analysis is done in the same place. So either within Galaxy for both, or outside of Galaxy for both.

For how to use Mothur in Galaxy, please see the tutorial here: http://galaxyproject.github.io/training-material/topics/metagenomics/

Hope that helps! Jen, Galaxy team

ADD COMMENTlink written 8 months ago by Jennifer Hillman Jackson25k
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