Question: Add constaxonomy file from Mothur to Lefse
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gravatar for tone.tannas
12 weeks ago by
tone.tannas0 wrote:

I try to use my Mothur data in Galaxy to run Lefse. I manage to add my shared.file and design file, but not constaxonomy file. What can I have done wrong?

galaxy • 80 views
ADD COMMENTlink modified 12 weeks ago by Jennifer Hillman Jackson24k • written 12 weeks ago by tone.tannas0
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gravatar for Jennifer Hillman Jackson
12 weeks ago by
United States
Jennifer Hillman Jackson24k wrote:

Hello,

These tools work together best when all the analysis is done in the same place. So either within Galaxy for both, or outside of Galaxy for both.

For how to use Mothur in Galaxy, please see the tutorial here: http://galaxyproject.github.io/training-material/topics/metagenomics/

Hope that helps! Jen, Galaxy team

ADD COMMENTlink written 12 weeks ago by Jennifer Hillman Jackson24k
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