Question: Can not run sh run.sh in terminal "directory doesn't exist"
0
gravatar for anceamia
8 weeks ago by
anceamia0
anceamia0 wrote:

Hi,

I have successfully installed the Galaxy on my MAC and was able to run sh run.sh to open Galaxy in the web interface, but my terminal crashed and when I went back and wanted to open Galaxy again it tells me that sh run.sh command not in the directory. The $ git clone -b release_17.09 https://github.com/galaxyproject/galaxy.git has installed. Is there a way to uninstall and try to install again?

Please help.

Thanks.

software error galaxy • 78 views
ADD COMMENTlink modified 8 weeks ago by Jennifer Hillman Jackson23k • written 8 weeks ago by anceamia0
0
gravatar for Jennifer Hillman Jackson
8 weeks ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello,

Are you running the command inside the galaxy directory installed by git? If not, try that first.

If the command then gives a new error, and it might if the prior process running did not entirely shut down, you should kill the process completely, then start up Galaxy again. This is how: https://galaxyproject.org/admin/get-galaxy/#shutting-down-galaxy

It is always possible to delete the existing galaxy directory and reinstall, but that shouldn't be necessary unless somehow the installation itself became corrupted during the crash.

Give these options a try and please let us know if you need more help.

Thanks, Jen, Galaxy team

ADD COMMENTlink written 8 weeks ago by Jennifer Hillman Jackson23k
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