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• RNA-star memory error on galaxy
  I am trying to run RNA-star on galaxy for my zebrafish SE and PE samples. However, it is getting ...
• Error "Out Of Memory" When Trying To Retrieve Output
  Hello, I wanted to download the accepted junction .bam file from tophat output of my local instan...
• Error message: This job was terminated because it used more memory than it was allocated
  Hi,  I'm processing exome data (enriched with Nextera kit) in Galaxy. After mapping the reads us...
• Using more memory than what allocated
  I keep getting this message when running cuffdiff "This job was terminated because it used more m...
• How to resolve the reason for job was terminated
  Hello, Recently, I have some RNA-seq data to analysis using Galaxy. Now I have a ...
• RNA Structure memory usage
  Hi, I'm trying to get the RNA Structure pipeline to work, but I'm running in to trouble. I have s...
• MACS2 bdgdiff and Diffbind problem - job was terminated because it used more memory than it was allocated
  Hi all. I'm having som trouble running both MACS2 bgddiff and Diffbind. It keeps returning the er...
• Galaxy crashing, running out of memory (database upload?)
  Hi,   For some reason my Galaxy process gets killed because it runs out of memory after a few s...
• Please give me help to solve this problem about cuffdiff, thank you very much!
  Hello, Excuse me, I want to seek help. Recent I am using galaxy workflow to analysi...
• MACS2 error in galaxy
  I'm a longtime galaxy user but since they updated MACS2, I keep getting the following error: "Thi...
• Memory allocation error while trying to align paired end reads using RNA STAR
  Hi This is my first time using Galaxy for RNA Seq analysis. After uploading and normalizing my r...
• bam to VCF
  Hi, I am trying to get all the variants from sequencing data. From fastaq, I got BAM files. Then...
• Error when trying to create heatmap
  Hello. I am new to galaxy and trying to learn. I am trying to recreate the heatmap here: http:...
• How to develop a simple function/tool on local galaxy
  Dear All I would like to try developing a tool onto Galaxy. Perhaps something as simple as displ...
• Error in SNPSift Annotate
  Hello, I am trying to annotate variants from Freebayes Output using SNPSift annotate too...
• RNA STAR Gapped-read mapper for RNA-seq data
  Hello Galaxy team, I am trying to map an RNAseq data to human reference genome using the RNA STA...
• Data import from EBI SRA to Galaxy does not work
  Dear Galaxy Team, There seems to be a persistent problem with importing fastq files from EBI SRA...