Question: How could I get more memory in Galaxy?
0
gravatar for sunnyjourney
13 months ago by
sunnyjourney0 wrote:

When I run hisat2, the error massage : "This job was terminated because it used more memory than it was allocated." So how could I get more memory in Galaxy?

galaxy • 402 views
ADD COMMENTlink modified 12 months ago by Jennifer Hillman Jackson25k • written 13 months ago by sunnyjourney0
0
gravatar for Jennifer Hillman Jackson
12 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

The input data/settings may really be creating a job that is too large, but often input problems can trigger memory errors. Once correct, the error resolves. Please see these FAQs:

https://galaxyproject.org/support/#troubleshooting

Thanks!

Jen, Galaxy team

ADD COMMENTlink written 12 months ago by Jennifer Hillman Jackson25k

I see your bug report and am reviewing.

ADD REPLYlink written 12 months ago by Jennifer Hillman Jackson25k

The issue is most likely the large size of the assembly-derived transcriptome. This is covered in the linked FAQs.

ADD REPLYlink written 12 months ago by Jennifer Hillman Jackson25k
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