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• Trinity error on usegalaxy.org
  Hello, I am running the trinity on usegalaxy.org , and I got an error message as below. workdir ...
• Trinity run failed at start- please help
  Hello, My Trinity run just failed with the error below. I'm trying to do a de novo assembly of ...
• Trinity is not working..again?
  Hi all! Apparently there are troubles with trinity, again. The output of Trinity is an empty fi...
• Trinity run ended with error
  Hello, My trinity run ended with an error saying "tool error An error occurred with this dataset...
• Probem with the Trinity de-novo assembly for big dataset (128GB)
  I had 48 paired end samples, I concatinae all the 24 forward and reverse paired separately and tr...
• Trinity Error Message
  Hi, I recently ran trinity and my job failed (red) with this error message:Fatal error: Exit code...
• Trinity analysis error before to start ?normalization? fastdump?
  Good morning everyone My trinity analysis is stucked before to start. I wonder what is the hipot...
• what is a "Tabular file with Transcript - Gene mapping" in DESeq2?
  I have RNA Seq data from two conditions using a non-model organism. I constructed a trinity assem...
• empty file returned after Trinity run
  After atempting to run Trinity (3rd time!) I received the following log: -------------- Trinity ...
• Trinity- error setting metadata
  Hello, I was finally able to get Trinity to run, but I've encountered an error. => "An error ...
• Failed to run trinity on a fastq file
  I have uploaded a ~3GB fastq file downloaded from SRA database and filtered it with fastx toolkit...
• Is Trinity currently working?
  I'm trying to run Trinity but keep receiving the following error message: "Remote job server indi...
• Trinity Error, job did not complete
  Hello, I asked a question last week regarding my Trinity assembly. It would not start the run (a...
• Trinity still not running
  Hello, Trinity is still not working, job is waiting to run for two days. Magda
• Trinity + Unicycler assembly failures at https://usegalaxy.org
  Hi administrators, I tried to perform trinity assembly but an error has occurred "Remote job ser...
• Galaxy Install Issues - pip version
  I've tried to deploy/run Galaxy on two different OS's (CentOS7 and Ubuntu) with no success. Keep...
• trinity error: possible unintended interpolation of @2 in string...
  Hi, when I run trinity in local galaxy, it is error: Fatal error: Exit code 2 () Possibl...
• Question on Trinity Galaxy
  I just installed a local version of galaxy on my 64 gb, 8 core machine. I used some tools success...
• Trinity queue times
  every time Trinity is showing error. the tool is not processing the seq data. Is there any altern...
• set_environment fails to set up Trinity path
  I have a local galaxy instance on which I am trying to run Trinity. I have the following in my ba...
• Trinity, Unicycler Job Error "Remote job server indicated a problem running or monitoring this job."
  When attempting Trinity assemblies with Trimmomatic paired end files, the run fails and I receive...
• Trinity - problem while assembling fastqsanger reads
  After concatenating the all the forward reads together and doing the same with the reverse reads,...