Question: Bismark dataset renaming problem in Galaxy
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gravatar for Supertech
9 months ago by
Supertech0
Supertech0 wrote:

Hi, I am using Bismark bisulfite mapper (bowtie2) (Galaxy Version 0.10.2) in a local installation. I am having trouble by renaming the output datasets (in the section of Configure Output). Info at Galaxy says that “Valid inputs are: refGenomeSource|ownFile, singlePaired|mate_list_0|input_mate1, singlePaired|mate_list_0|input_mate2”

I tried few of them in the following format, but I could not get it work.

#{input_mate1|basename}.extension

What I get is only the extensions after “.” Is there any advice on this? Thanks.

galaxy • 187 views
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