Question: fastq.gz file can not auto uncompress
0
gravatar for atcglj
22 months ago by
atcglj10
atcglj10 wrote:

I uploaded two fastq.gz files to usegalaxy.org using FTP. The first one worked well. The second one seemed could not be uncompressed automatical and show "uploaded fastq.gz file" and "format: fastq.gz" in the preview window of History. The first one show "format: fastq" and my sequences detail as usual in the preview. Both of these fastq.gz files worked on my own computer well. I try to gzip the second file in the CentOS and upload again but without success. Could anyone help me? Thanks.

galaxy • 1.1k views
ADD COMMENTlink modified 22 months ago by Martin Čech ♦♦ 4.9k • written 22 months ago by atcglj10

I am having the same problem. Does anyone know if there is a way to unzip the file in Galaxy if it fails to do so automatically?

ADD REPLYlink written 22 months ago by bryantl90
1
gravatar for Martin Čech
22 months ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

I have answered this in another question: https://biostar.usegalaxy.org/p/21392/#21403

ADD COMMENTlink written 22 months ago by Martin Čech ♦♦ 4.9k
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