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• fastq.gz file can not auto uncompress
  I uploaded two fastq.gz files to usegalaxy.org using FTP. The first one worked well. The second o...
• What is the difference between a label and name?
  I am very new to Galaxy and am learning about workflows with the final aim of making a workflow f...
• File import after FTP upload doesn't work
  I uploaded fastq.gz files to the galaxy ftp server, and use the "upload file" function to try to ...
• how to uncompress fastq.gz automatically in galaxy
  Hi, I set up a local galaxy server. i'd like to upload the .fastq.gz file and format it to fastq...
• Decompressing files on local galaxy
  HI, I am using local instance of Galaxy. I have uploaded my dataset and they are in fastq.gz fo...
• fastqc on fastq.gz files in galaxy?
  What do I need to convert a fastq.gz file (from ENA) to so galaxy fastqc will accept it? thanks r
• file format conversion
  My RNAseq files in txt.bZ2 format. Is there anyway to convert them into fastq.gz?. Thanks
• Setting datatype for datasets during Upload or once in the Galaxy history
  if a .fastq.gz file can be uploaded to be analysed? and do i have to change the type of the file ...
• uploaded FASTQ not showning in the pulldown menu
  Hi,   I FTPed .fastq.gz files to Galaxy server and uploaded to Galaxy (appear in the history me...
• Do not want fastq.gz file to be unziped by galaxy automatically.
  Hi  I am developing one wrapper for my local galaxy server. My tools take fastq.gz format as inp...
• fastq.gz files receiving error (Problem decompressing)
  I uploaded 8 fastq.gz files. Two decompressed fine upon upload the remaining six say: Problem de...
• Fastq.gz files in shared Data Libraries
  Hi, I have a production local version of galaxy running at our institution. After our illumina s...
• FTP upload is crashing with large files (3GB)
  Anyone had trouble uploading large files to galaxy FTP? It is my first time, I am trying to uploa...
• upload FTP fastq.gz files on new local galaxy installation, but they just sit there as grey (job waiting to run)
  HI  I just installed a local version of Galaxy I have just tried to 'get data>upload file &gt...
• Trouble With Rnaseq Analysis
  Hi everybody, I am trying to analyze the differential expression between two RNAseq samples. But ...
• Genome Assembly With Velvet in Galaxy
  I have found data for E.coli sequencing reads. Following are paired end reads of E.coli ftp://f...
• Can i upload file with extension gz?
  Hi, Can I upload a 17G DNA sequence data file with extension .fastq.gz through FTP? Thanks, Ren
• Unzip files on Galaxy
    Hello, I have a fastq.gz file downloaded from SRA that need unzipped. How can I do this on Ga...
• Variant mapping workflow and tutorial in Galaxy
  Hi, I have a zebrafish mutant that I am trying to map. So I did the mapping crosses and sequenced...
• Problem uploading data
  I just registered a Galaxy account. When attempting to upload fastq.gz files on the order of 120 ...
• Galaxy Cloud: Location Of Imported And Converted Fastq'S
  Hi, I had fastq.gz files in an Amazon S3 bucket. I created a Galaxy on the Cloud instance usin...
• Enable to login ftp://usegalaxy.org
  I want to upload my RNA seq Fastq.gz files in galaxy but while uploading as they exceed 2 GB data...
• Galaxy does not seem to recognize zipped files
  I uploaded fastq.gz files, each around 3 Gigabytes. I used ftp to upload. However, when I try to ...