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• No Mm5 Sequence Data In Galaxy 2.2
  when i try to download sequences for mm5 (uploaded bed file) i get an error: 4: Extract genomic ...
• mapping sanger sequencing files
  I have over 600 ab1 files generated by sanger sequencing. they represent different splicing forms...
• aaChanges Errors
  When I try to run aaChanges  I get the following error, Sequences are not currently available for...
• Hmm Tool In Galaxy??
  Hi, Are there any tools like HMMER (2.3.2 or 3.0) available on Galaxy to run a HMM on a DNA or p...
• New Software Needed
  Hi Jenn, I am working on RAD-sequencing. Two available softwares for analyzing RAD tags are Stac...
• galaxy tools NGS data analysis
  Is there any video/article available for a step by step processing of raw files received after NG...
• Mapping To Only 3 Genes / Targeted Resequencing / Solid4 / Short Reads
  Hi! Following situation: 10 barcoded "samples". Each sample consists of a mix of the sequences 3...
• Problems With Galaxy Kindly Reply Urgently
  Dear Galaxy, We have installed Galaxy on one of our Institute's server http:...
• Problems With Galaxy Kindly Reply Urgently
  Dear Galaxy, We have installed Galaxy on one of our Institute's server http...
• Blast sequence using bacterial genome of ncbi
  Hello, I have installed my galaxy on local server and successfully and added NCBI BLAST plus. I ...
• Cucumber Genome
  Hi, In the NGS mapping option with "lastz" I cannot find the Cucumber genome.* *Could you please...
• Galaxy package(s) for gene expression
  Hello, We have RNA-Seq sequences in bam format and would like to perform gene expression analysi...
• GATK in galaxy
  whenever i try to run GATK in galaxy Im getting this following error "Sequences are not currentl...
• Cucumber Genome
  Hi, In the NGS mapping option with "lastz" I cannot find the Cucumber genome.* *Could you please...
• Need help with "aaChanges" tool
      Hi, When I enter in files for SNP dataset and Gene dataset, I always get the error "Sequen...
• Sequences Are Not Currently Available For The Specified Build
  Hi all, We are just beginning to analyze RNA-seq data and hope to make use of the Galaxy tools. W...
• Realigner Target Creator in GATKtools
  Hi, I am attempting to realign with Realigner Target Creator in GATKtools. However, when I uploa...
• Locally cached sequence not detected from DBkey in cuffmerge when using mm10
  Hi, I'm running a cufflinks pipeline on the public server, and I'm having trouble using the loca...
• Completegenomics Publicly Available Genomes.
  Is there a plan to add the 69 publicly available genomes from CompleteGenomics to the SharedData ...