Question: viramp file upload error
gravatar for ldorsey6
3.0 years ago by
ldorsey60 wrote:

I am trying to use viramp to do a virus de novo assembly. The fastq read files I am using are each 4.4 gb, so I am trying to upload them via the URL method. I keep getting an error, and I don't know if its my URL or the program. I tried uploading a smaller bam file, which is less than 1 gb, and I keep getting the same error. I put links to the images to show my input and the error. Any advice would be great! The link does lead to the file contents, so I'm wondering if its because its a secure http.


Here's an image of what the url should connect to.

ADD COMMENTlink modified 3.0 years ago by Jennifer Hillman Jackson25k • written 3.0 years ago by ldorsey60
gravatar for Jennifer Hillman Jackson
3.0 years ago by
United States
Jennifer Hillman Jackson25k wrote:


The data must be public in order to import it using a URL. If you wish for it to remain private, it can be downloaded to your filesystem (outside of Galaxy) then loaded into your local Galaxy directly into a library. Here is how: Admin/DataLibraries/UploadingLibraryFiles

You could also set up FTP on your Galaxy local, but the methods in the link above are uncomplicated alternatives when there is just one user.

Thanks for using Galaxy, Jen, Galaxy team


ADD COMMENTlink written 3.0 years ago by Jennifer Hillman Jackson25k

Thanks, Jen.

I downloaded galaxy locally, but now can't seem to find viramp. Is it not located in the toolshed? 


ADD REPLYlink written 3.0 years ago by ldorsey60
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