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Question: about 'IGV view'
2
gravatar for hudiejie
3.8 years ago by
hudiejie • 20
Singapore
hudiejie • 20 wrote:

Hi, I wanted to display my bowtie or cuffmerge result in IGV view, the sentence came out:

'The file you are trying to view does not have a genome version associated with it. Please return to Galaxy and associate a genome version with the file and try again.'

How could I do to add a genome to the file?
igv • 1.6k views
ADD COMMENT • link •
modified 3.8 years ago by Hotz, Hans-Rudolf • 1.8k • written 3.8 years ago by hudiejie • 20
4
gravatar for Hotz, Hans-Rudolf
3.8 years ago by
Hotz, Hans-Rudolf • 1.8k
Switzerland
Hotz, Hans-Rudolf • 1.8k wrote:

Hi

If you look at the pre-view of your dataset in the history (i.e. click on the history item name): Do you have a "?" next to database?

Click on the question mark, and select a 'Database/Build'. Then try to display it again in IGV.

 

Hope this helps, Hans-Rudolf

 
ADD COMMENT • link written 3.8 years ago by Hotz, Hans-Rudolf • 1.8k

Hi Hans-Rudolf,

Thank you very much for your reply and I can find a lot of existed database to choose as a database.

And besides, I can add in new database/build if the genome which is not in the database list as a reference. : )

ADD REPLY • link written 3.8 years ago by hudiejie • 20
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