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Question: assembly of genomic DNA reads
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gravatar for raghvendra1986singh
3.8 years ago by
raghvendra1986singh • 0
United States
raghvendra1986singh • 0 wrote:

Dear All,

I have have query regarding assembly of sequencing reads.

Is there any technical difference between RNA-seq assembly and Genomic DNA assembly (either denovo or guided)??

Thank you

 
assembly genomic dna denovo • 735 views
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modified 3.8 years ago by Jennifer Hillman Jackson ♦ 25k • written 3.8 years ago by raghvendra1986singh • 0
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gravatar for Jennifer Hillman Jackson
3.8 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

This is a big question. But the short answer is yes, in particular if you are performing the DNA assembly for a complete genome, or a larger genomic region (that covers more than just regions of interest, e.g. includes multiple gene bounds). 

Maybe you could be more specific about your analysis project? 

Thanks, Jen, Galaxy team
ADD COMMENT • link written 3.8 years ago by Jennifer Hillman Jackson ♦ 25k
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