Question: miSEQ data analysis
gravatar for reach2anamika
4.4 years ago by
United States
reach2anamika10 wrote:

I have the miSeq paired end reads as two different fastaq files. How can I assemble/merge them through galaxy?

galaxy • 2.3k views
ADD COMMENTlink modified 4.4 years ago by Bjoern Gruening5.1k • written 4.4 years ago by reach2anamika10
gravatar for Bjoern Gruening
4.4 years ago by
Bjoern Gruening5.1k
Bjoern Gruening5.1k wrote:

Sure, you can process it with Galaxy standard tools! Start with the mapping of your reads with bowtie2 and depending on your experiment (RNA-seq? ChIP-seq?) start your downstream analysis. To get started it's always good to have a look at the Galaxy Videos and Tutorials at

Happy research!


ADD COMMENTlink written 4.4 years ago by Bjoern Gruening5.1k
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