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Question: Clip Adapter Sequence
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gravatar for sean.li
3.4 years ago by
sean.li • 0
Canada
sean.li • 0 wrote:

Good morning,

I am very new in using Galaxy. I would like to use Clip to remove the adapter sequences in my metagenomic data obtained using Illumina MiSeq and HiSeq. However, how could I get the datasets stored in history folder? Thank you very much for your help.

Cheers

Sean 
fastq clip datatype fastqsanger trimmomatic • 1.1k views
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modified 3.4 years ago by Jennifer Hillman Jackson ♦ 25k • written 3.4 years ago by sean.li • 0

How could I access the datasets stored in the history folder for using in the Clip? 

Thank you very much for your help.
Sean
ADD REPLY • link written 3.4 years ago by sean.li • 0
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gravatar for frederik.coppens
3.4 years ago by
frederik.coppens • 40
VIB, Gent, Belgium
frederik.coppens • 40 wrote:

What type of data do you have in your history? (if you click on the name, there is info on 'format'). Clip works with fasta, fastqsanger, fastqsolexa and fastqillumina. Only if it's one of these it will be available as input.

 

Frederik
ADD COMMENT • link written 3.4 years ago by frederik.coppens • 40
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