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Question: Bowtie And Bwa Queue..Other Jobs Dont
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gravatar for Antony Jose
6.4 years ago by
Antony Jose • 70
Antony Jose • 70 wrote:
Hi, Bowtie and BWA jobs seem to be forever on queue, but other jobs run normally. Is there a problem or is this expected? Thank you. Antony -- Antony M Jose, Dept. of Cell Biology & Molecular Genetics, University of Maryland, Rm 2116, Bioscience Research Building, College Park, MD - 20742.
bwa alignment bowtie • 647 views
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modified 6.4 years ago by Jennifer Hillman Jackson ♦ 25k • written 6.4 years ago by Antony Jose • 70
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gravatar for Jennifer Hillman Jackson
6.4 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:
Hi Antony, Jobs are sent to different clusters by type, so it is not unusual to see some jobs complete quickly while others take longer. Jobs on the NGS cluster (where Bowtie and BWA would be run) are processing as normal, but Galaxy was very busy over the weekend and continues to be busy this morning. Right now I see that you have only one NGS job in the queue - so perhaps at least some of your work has completed since this question was originally sent in on Saturday. If your work is urgent, a cloud instance is the recommended alternative for large NGS jobs: http://getgalaxy.org/cloud Best, Jen Galaxy team -- Jennifer Jackson http://galaxyproject.org
ADD COMMENT • link written 6.4 years ago by Jennifer Hillman Jackson ♦ 25k
Thank you Jen. My job is still waiting and we shall consider a cloud instance. Antony -- Antony M Jose, Dept. of Cell Biology & Molecular Genetics, University of Maryland, Rm 2116, Bioscience Research Building, College Park, MD - 20742.
ADD REPLY • link written 6.4 years ago by Antony Jose • 70
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