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Question: Walltime Exceeded
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gravatar for Hemarajata, Peera
6.8 years ago by
Hemarajata, Peera • 40
Hemarajata, Peera • 40 wrote:
Dear all, My Cufflinks jobs keep getting killed due to the walltime limit. Is there a way to fix this or is there anything I can do to reduce the size of my BAM datasets so the analysis can get done? Thank you! Peera Hemarajata
rna-seq cufflinks • 747 views
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modified 6.8 years ago by Jeremy Goecks • 2.2k • written 6.8 years ago by Hemarajata, Peera • 40
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gravatar for Jeremy Goecks
6.8 years ago by
Jeremy Goecks • 2.2k
Jeremy Goecks • 2.2k wrote:
Peera, Turning off bias correction can significantly shorten Cufflinks runtime. If you still encounter this error, you'll want to use a local or cloud instance of Galaxy: https://bitbucket.org/galaxy/galaxy-central/wiki/GetGalaxy http://wiki.g2.bx.psu.edu/Admin/Cloud Good luck, J.
ADD COMMENT • link written 6.8 years ago by Jeremy Goecks • 2.2k
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