Question: HTML page output in history - no css gets loaded
gravatar for bankapur
2.8 years ago by
United States
bankapur0 wrote:


My pipeline produces an html report with links to other html pages. I have integrated this report into my galaxy instance as a tool output using the following information:

However the css involved in the in index page doesn't get loaded. There is no error message I see in the debugger console. Any ideas as to how I can achieve this?

Thank you,





html history • 1.0k views
ADD COMMENTlink modified 2.8 years ago by Dannon Baker3.7k • written 2.8 years ago by bankapur0
gravatar for Dannon Baker
2.8 years ago by
Dannon Baker3.7k
United States
Dannon Baker3.7k wrote:

Hi Asma,

Have you whitelisted the tool output in your Galaxy instance?  By default, all outputs viewed in Galaxy go through some display sanitization for security reasons, which might be causing this issue for you.  You can find the whitelist in the Galaxy admin panel under "Manage Display Whitelist".

ADD COMMENTlink written 2.8 years ago by Dannon Baker3.7k

Hi Dannon,

Thank you for your reply. I couldn't find "Manage Display Whitelist" under Galaxy admin panel however I switched the following settings in galaxy.ini file:

sanitize_all_html = False

serve_xss_vulnerable_mimetypes = True

This helped in getting the proper css to load, however the JS associated with the page doesn't get loaded and error I receive in the console is as follows:

Refused to execute script from '' because its MIME type ('text/html') is not executable, and strict MIME type checking is enabled.

Is there some other setting in galaxy that needs to be turned on/off to enable js?

Thank you,



ADD REPLYlink written 2.8 years ago by bankapur0
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